{"id":41883,"date":"2024-03-27T01:57:32","date_gmt":"2024-03-27T06:57:32","guid":{"rendered":"https:\/\/stage.cancerimagingarchive.net\/collection\/radcure\/"},"modified":"2024-12-19T08:58:34","modified_gmt":"2024-12-19T14:58:34","slug":"radcure","status":"publish","type":"tcia_collection","link":"https:\/\/stage.cancerimagingarchive.net\/collection\/radcure\/","title":{"rendered":"RADCURE"},"featured_media":0,"template":"","class_list":["post-41883","tcia_collection","type-tcia_collection","status-publish"],"cancer_types":["Oropharyngeal Cancer"],"citations":[41871,41873,9225],"collection_doi":"10.7937\/J47W-NM11","collection_download_info":"Some data in this collection contains images that could potentially be used to reconstruct a human face. To safeguard the privacy of participants, users must sign and submit a <a href=\"\/wp-content\/uploads\/TCIA-Restricted-License-20220519.pdf\">TCIA Restricted License Agreement<\/a> to <a href=\"mailto:help@cancerimagingarchive.net\">help@cancerimagingarchive.net<\/a> before accessing the data.","collection_downloads":[41875,41877,41879,41881,50263],"versions":[50253,48401,47013],"additional_resources":"","cancer_locations":["Head-Neck"],"collection_page_accessibility":"Limited","publications_related":"The Collection authors recommend these readings to give context to this dataset\r\n\r\nKazmierski, M., Welch, M., Kim, S., McIntosh, C., Rey-McIntyre, K., Huang, S. H., Patel, T., Tadic, T., Milosevic, M., Liu, F.-F., Ryczkowski, A., Kazmierska, J., Ye, Z., Plana, D., Aerts, H. J. W. L., Kann, B. H., Bratman, S. V., Hope, A. J., &amp; Haibe-Kains, B. (2023). <strong>Multi-institutional Prognostic Modeling in Head and Neck Cancer: Evaluating Impact and Generalizability of Deep Learning and Radiomics<\/strong>. In Cancer Research Communications (Vol. 3, Issue 6, pp. 1140\u20131151). American Association for Cancer Research (AACR). <a href=\"https:\/\/doi.org\/10.1158\/2767-9764.crc-22-0152\">https:\/\/doi.org\/10.1158\/2767-9764.crc-22-0152<\/a>","version_change_log_archived":"<h3>Version 1 (Current): Updated 2023\/06\/14<\/h3><table><colgroup><col \/><col \/><col \/><\/colgroup><tbody><tr><th>Data Type<\/th><th>Download all or Query\/Filter<\/th><th>License<\/th><\/tr><tr><td>Images (DICOM, 324 GB)<\/td><td><div><p><a href=\"\/wp-content\/uploads\/RADCURE-Phase-1-release-Jun-1-2023.tcia\" download=\"RADCURE-Phase-1-release-Jun-1-2023.tcia\"><button><i><\/i> Download<\/button><\/a>\u00a0 <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=RADCURE\"><button><i><\/i> Search<\/button><\/a>\u00a0<\/p><p>(Download requires\u00a0the\u00a0<a href=\"\/display\/NBIA\/Downloading+TCIA+Images\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><td><div><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\">TCIA Restricted<\/a><\/p><\/div><\/td><\/tr><tr><td><p>Images and Radiation Therapy Structures, updated OPC-Radiomics (DICOM, 57 GB)<\/p><\/td><td><div><br \/><p><a href=\"\/wp-content\/uploads\/RADCURE-OPC-only-Phase-1-manifest-Jun-1-2023.tcia\" download=\"RADCURE-OPC-only-Phase-1-manifest-Jun-1-2023.tcia\"><button><i><\/i> Download<\/button><\/a>\u00a0 <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?saved-cart=nbia-22801683744260516\"><button><i><\/i> Search<\/button><\/a>\u00a0<\/p><p>(Download requires\u00a0the\u00a0<a href=\"\/display\/NBIA\/Downloading+TCIA+Images\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><td><div><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\">TCIA Restricted<\/a><\/p><\/div><\/td><\/tr><tr><td>Clinical data (XLSX)<\/td><td><div><p><a href=\"\/wp-content\/uploads\/RADCURE_TCIA_Clinical-June-13-2023.xlsx\" download=\"RADCURE_TCIA_Clinical-June-13-2023.xlsx\"><button><i><\/i> Download<\/button><\/a>\u00a0<\/p><\/div><\/td><td><div><p><a href=\"https:\/\/creativecommons.org\/licenses\/by\/4.0\/\">CC BY 4.0<\/a><\/p><\/div><\/td><\/tr><tr><td>Patient ID Mapping-RADCURE patient id to OPC-RADIOMICS patient id (CSV)<\/td><td><div><p><a href=\"\/wp-content\/uploads\/RADCURE-patient-id-to-OPC-Radiomics-patient-id-mapping.csv\" download=\"RADCURE-patient-id-to-OPC-Radiomics-patient-id-mapping.csv\"><button><i><\/i> Download<\/button><\/a>\u00a0<\/p><\/div><\/td><td><div><p><a href=\"https:\/\/creativecommons.org\/licenses\/by\/4.0\/\">CC BY 4.0<\/a><\/p><\/div><\/td><\/tr><\/tbody><\/table>","collection_status":"Complete","publications_using":"TCIA maintains\u00a0<a href=\"https:\/\/commons.datacite.org\/doi.org\/10.7937\/J47W-NM11\">a list of publications<\/a>\u00a0that leveraged this dataset. If you have a manuscript you\u2019d like to add please\u00a0<a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\">contact TCIA\u2019s Helpdesk<\/a>.","related_analysis_results":false,"species":["Human"],"version_number":"4","collection_title":"Computed Tomography Images from Large Head and Neck Cohort","date_updated":"2024-12-19","related_collection":false,"subjects":"3346","analysis_results":"","collection_short_title":"RADCURE","data_types":["CT","RTSTRUCT"],"version_change_log":"<ol>\r\n \t<li>RADCURE full manifest: Removed 2994 \"Phase 1\" RTSTRUCTs.<\/li>\r\n \t<li>OPC subset manifest: Removed 536 \"Phase 1\" RTSTRUCTs and added 603 \"Phase 2\" RTSTRUCTs.<\/li>\r\n \t<li>Clinical data: removed \"?\" and extra space in 2 column names.<\/li>\r\n \t<li>Added Contour mapping spreadsheet: original contour names to TG263 standardized nomenclature<\/li>\r\n<\/ol>","collection_browse_title":"RADCURE","detailed_description":"","supporting_data":["Clinical"],"collection_featured_image":false,"collection_summary":"<p>The RADCURE dataset was collected clinically for radiation therapy treatment planning and retrospectively reconstructed for quantitative imaging research.\u00a0\u00a0<\/p><p><strong>Inclusion<\/strong>: The dataset used for this study consists of 3,346 head and neck cancer CT image volumes collected from 2005-2017 treated with definitive RT at the University Health Network (UHN) in Toronto, Canada<\/p><p><strong>Acquisition and Validation Methods<\/strong>: RADCURE contains computed tomography (CT) images with corresponding normal and non-normal tissue contours. CT scans were collected using systems from three different manufacturers. Standard clinical imaging protocols were followed, and contours were generated and reviewed at weekly quality assurance rounds. RADCURE imaging and structure set data was extracted from our institution\u2019s radiation treatment planning and oncology systems using an in-house data mining and processing system. Furthermore, images are linked to clinical data for each patient and include demographic, clinical and treatment information based on the <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/20180029\/\">7th edition TNM staging system<\/a>. The median patient age is 63, with the final dataset including 80% males. Oropharyngeal cancer makes up 50% of the population with larynx, nasopharynx, and hypopharynx cancer, comprising 25, 12, and 5% respectively. Median follow-up was 5 years with 60% of the patients alive at last follow-up. \u00a0\u00a0<\/p><p><strong>Data Format and Usage Notes<\/strong>: During extraction of images and contours from our institution\u2019s radiation treatment planning and oncology systems, the data was converted to DICOM and RTSTRUCT formats, respectively. To improve the usability of the RTSTRUCT files, individual contour names were standardized for primary tumor volumes and 19 organs-at-risk. Demographic, clinical, and treatment information is provided as a comma-separated values (csv) file. This dataset is a superset of the <a href=\"https:\/\/doi.org\/10.7937\/tcia.2019.8dho2gls\" target=\"_blank\" rel=\"noopener\">Radiomic Biomarkers in Oropharyngeal Carcinoma (OPC-Radiomics)<\/a> dataset and fully encapsulates all previous data; this dataset replaces the OPC-Radiomics dataset. The RTSTRUCTs from OPC-Radiomics have been standardized to adhere to the <a href=\"https:\/\/www.aapm.org\/pubs\/reports\/RPT_263.pdf\">TG263<\/a> nomenclature.\u00a0Age of 90 years or greater is considered PHI and set to 90 years to minimize impact to privacy. Both radiological and clinical metadata were offset by an undisclosed number of days for anonymization and should be noted for downstream analysis.\u00a0The <a href=\"https:\/\/www.aapm.org\/pubs\/reports\/RPT_263.pdf\">TG263-standardized<\/a> RTSTRUCTs include only the GTVp (primary gross tumor volume) contours. Patients without corresponding GTVp contours will not have RTSTRUCTs.<\/p><p><strong>Potential Applications<\/strong>:\u00a0The availability of imaging, clinical, demographic and treatment data in RADCURE makes it a viable option for a variety of quantitative image analysis research initiatives. This includes the application of machine learning or artificial intelligence methods to expedite routine clinical practices, discover new non-invasive biomarkers, or develop prognostic models. \u00a0<\/p>","collection_acknowledgements":"<p>We would like to acknowledge the individuals and institutions that have provided data for this collection:<\/p><ul><li><p>University Health Network (UHN), Toronto, Ontario, Canada\u00a0- Special thanks to \u00a0Scott Bratman, PhD, Department of Radiation Oncology and Medical Biophysics, University of Toronto.\u00a0<\/p><\/li><\/ul>","collection_funding":"","hide_from_browse_table":"0","program":["Community"],"_links":{"self":[{"href":"https:\/\/stage.cancerimagingarchive.net\/api\/v1\/collections\/41883","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/stage.cancerimagingarchive.net\/api\/v1\/collections"}],"about":[{"href":"https:\/\/stage.cancerimagingarchive.net\/api\/wp\/v2\/types\/tcia_collection"}],"version-history":[{"count":1,"href":"https:\/\/stage.cancerimagingarchive.net\/api\/v1\/collections\/41883\/revisions"}],"predecessor-version":[{"id":47269,"href":"https:\/\/stage.cancerimagingarchive.net\/api\/v1\/collections\/41883\/revisions\/47269"}],"wp:attachment":[{"href":"https:\/\/stage.cancerimagingarchive.net\/api\/wp\/v2\/media?parent=41883"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}