{"id":46035,"date":"2023-11-20T05:48:46","date_gmt":"2023-11-20T11:48:46","guid":{"rendered":"https:\/\/stage.cancerimagingarchive.net\/versions\/plethora-ver2\/"},"modified":"2023-11-20T05:48:46","modified_gmt":"2023-11-20T11:48:46","slug":"plethora-ver2","status":"publish","type":"versions","link":"https:\/\/stage.cancerimagingarchive.net\/versions\/plethora-ver2\/","title":{"rendered":"PLETHORA-VER2"},"template":"","class_list":["post-46035","versions","type-versions","status-publish"],"version_number":"2","version_text":"<p><strong>Version 2 changes:<\/strong><\/p>\n<ul><li>The dataset is now named \u201cPleThora\u201d for \u201c<strong><u>Ple<\/u><\/strong>ural effusion and <strong><u>thor<\/u><\/strong>acic cavity segmentations in diseased lungs.\u201d<\/li><li>All NIfTI files have been compressed for convenience (.nii \u00e0 .nii.gz)<\/li><li>All thoracic cavity primary reviewer segmentations have been renamed from \u201clungMask_edit.nii\u201d to \u201c[CaseID]_thor_cav_primary_reviewer.nii.gz\u201d to more specifically identify each file\u2019s contents and avoid confusion.<\/li><li>Eighty-six thoracic cavity secondary reviewer segmentations have been added. These are named \u201c[CaseID]_thor_cav_secondary_reviewer.nii.gz.\u201d<\/li><li>Interobserver variability analysis between primary and secondary reviewer thoracic cavity segmentations revealed four cases in which interobserver agreement was anomalously lower than all other cases. These cases were manually re-reviewed by another physician. In three cases (LUNG1-026, LUNG1-157, and LUNG1-354) it was deemed that the secondary reviewer\u2019s segmentation excluded structures that should have been included. These were corrected. In one case (LUNG-088) it was determined that the primary reviewer segmentation included a large (400 cm3) nodal conglomerate. Our original thoracic cavity segmentation definition did not intend to include nodal conglomerates, so for consistency\u2019s sake we corrected the primary reviewer segmentation accordingly. However, the segmentation with the nodal conglomerate is still valuable, so we provide it as well and name it \u201cLUNG1-088_thor_cav_primary_reviewer_with_nodal_conglomerate.nii\u201d<\/li><li>We manually reviewed the pleural effusion segmentations of the primary physician reviewer and determined that in many cases the reviewer had not been sufficiently careful. Therefore, all 78 primary reviewer segmentations were re-reviewed by another physician and corrected as necessary. They are now re-submitted as \u201c[CaseID]_effusion_first_reviewer.nii.gz\u201d<\/li><li>Seventy-eight pleural effusion secondary reviewer segmentations have been added. These are named \u201c[CaseID]_effusion_second_reviewer.nii.gz.\u201d<\/li><li>Fifteen pleural effusion tertiary reviewer segmentations have been added. 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