{"id":9009,"date":"2023-09-14T01:04:45","date_gmt":"2023-09-14T06:04:45","guid":{"rendered":"https:\/\/stage.cancerimagingarchive.net\/mrqy_gbm_results_v1\/"},"modified":"2024-02-28T19:27:56","modified_gmt":"2024-02-29T01:27:56","slug":"mrqy_gbm_results_v1","status":"inherit","type":"attachment","link":"https:\/\/stage.cancerimagingarchive.net\/analysis-result\/mrqy-quality-measures\/mrqy_gbm_results_v1\/","title":{"rendered":"mrqy_gbm_results_v1"},"author":29,"featured_media":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_searchwp_excluded":"","_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0},"class_list":["post-9009","attachment","type-attachment","status-inherit"],"description":{"rendered":"<p class=\"attachment\"><a href=\"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1.png\" rel=\"prettyPhoto[gallery-8rBs]\"><img loading=\"lazy\" decoding=\"async\" width=\"300\" height=\"170\" src=\"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-300x170.png\" class=\"attachment-medium size-medium\" alt=\"\" srcset=\"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-300x170.png 300w, https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-1024x580.png 1024w, https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-768x435.png 768w, https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-1536x871.png 1536w, https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-2048x1161.png 2048w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p>(a) MRQy front-end interface for interrogating TCGA-GBM cohort. (b) Outlier dataset identified on the parallel coordinate chart for the CJV quality measure found to exhibit shading artifacts on (c) representative images, especially when compared to (d) a different dataset without this artifact. (e) t-SNE scatter plot of quality measures revealing presence of site-specific batch effects (colors correspond to different sites, note presence of site-specific clusters).<\/p>\n"},"caption":{"rendered":"<p>(a) MRQy front-end interface for interrogating TCGA-GBM cohort. (b) Outlier dataset identified on the parallel coordinate chart for the CJV quality measure found to exhibit shading artifacts on (c) representative images, especially when compared to (d) a different dataset without this artifact. (e) t-SNE scatter plot of quality measures revealing presence of site-specific batch effects (colors correspond to different sites, note presence of site-specific clusters).<\/p>\n"},"alt_text":"","media_type":"image","mime_type":"image\/png","media_details":{"width":2066,"height":1171,"file":"mrqy_gbm_results_v1.png","filesize":1313080,"sizes":{"medium":{"file":"mrqy_gbm_results_v1-300x170.png","width":300,"height":170,"filesize":46338,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-300x170.png"},"large":{"file":"mrqy_gbm_results_v1-1024x580.png","width":1024,"height":580,"filesize":368436,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-1024x580.png"},"thumbnail":{"file":"mrqy_gbm_results_v1-150x150.png","width":150,"height":150,"filesize":22335,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-150x150.png"},"medium_large":{"file":"mrqy_gbm_results_v1-768x435.png","width":768,"height":435,"filesize":225502,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-768x435.png"},"1536x1536":{"file":"mrqy_gbm_results_v1-1536x871.png","width":1536,"height":871,"filesize":736858,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-1536x871.png"},"2048x2048":{"file":"mrqy_gbm_results_v1-2048x1161.png","width":2048,"height":1161,"filesize":1188950,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-2048x1161.png"},"portfolio-thumb":{"file":"mrqy_gbm_results_v1-600x403.png","width":600,"height":403,"filesize":173937,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-600x403.png"},"nectar_small_square":{"file":"mrqy_gbm_results_v1-140x140.png","width":140,"height":140,"filesize":20154,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-140x140.png"},"portfolio-thumb_large":{"file":"mrqy_gbm_results_v1-900x604.png","width":900,"height":604,"filesize":350594,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-900x604.png"},"portfolio-thumb_small":{"file":"mrqy_gbm_results_v1-400x269.png","width":400,"height":269,"filesize":87628,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-400x269.png"},"portfolio-widget":{"file":"mrqy_gbm_results_v1-100x100.png","width":100,"height":100,"filesize":11870,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-100x100.png"},"wide":{"file":"mrqy_gbm_results_v1-1000x500.png","width":1000,"height":500,"filesize":328423,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-1000x500.png"},"wide_photography":{"file":"mrqy_gbm_results_v1-900x600.png","width":900,"height":600,"filesize":348669,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-900x600.png"},"wide_small":{"file":"mrqy_gbm_results_v1-670x335.png","width":670,"height":335,"filesize":165172,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-670x335.png"},"regular":{"file":"mrqy_gbm_results_v1-500x500.png","width":500,"height":500,"filesize":168494,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-500x500.png"},"regular_small":{"file":"mrqy_gbm_results_v1-350x350.png","width":350,"height":350,"filesize":91015,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-350x350.png"},"tall":{"file":"mrqy_gbm_results_v1-500x1000.png","width":500,"height":1000,"filesize":283488,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-500x1000.png"},"wide_tall":{"file":"mrqy_gbm_results_v1-1000x1000.png","width":1000,"height":1000,"filesize":548894,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-1000x1000.png"},"large_featured":{"file":"mrqy_gbm_results_v1-1870x770.png","width":1870,"height":770,"filesize":803102,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-1870x770.png"},"medium_featured":{"file":"mrqy_gbm_results_v1-800x800.png","width":800,"height":800,"filesize":377086,"mime_type":"image\/png","source_url":"https:\/\/stage.cancerimagingarchive.net\/wp-content\/uploads\/mrqy_gbm_results_v1-800x800.png"},"full":{"file":"mrqy_gbm_results_v1.png","width":2066,"height":1171,"mime_type"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