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ISBI-MR-Prostate-2013 | NCI-ISBI 2013 Challenge: Automated Segmentation of Prostate Structures
DOI: 10.7937/K9/TCIA.2015.zF0vlOPv | Data Citation Required | Analysis Result
| Location | Subjects | Size | Updated | |||
|---|---|---|---|---|---|---|
| Prostate | Prostate | 80 | Prostate structure segmentations | 2015/08/20 |
Summary
This data set was created for use in the NCI-ISBI 2013 Challenge – Automated Segmentation of Prostate Structures. The challenge data set was divided into 3 parts including training, leaderboard and test data sets. This allowed participants to prepare their algorithms and test their results prior to submitting to a final test phase for selecting the winner. Image data were selected from PROSTATE-DIAGNOSIS and Prostate-3T collections on TCIA. Cases consist of axial scans with half obtained at 1.5 T (Philips Achieva) with an endo-rectal receiver coil (fromBostonMedicalCenter) and the other half at 3T (Siemens TIM) with a surface coil (from Radboud University Nijmegen Medical Centre [RUNMC],Netherlands). They were acquired as T2-weighted MR axial pulse sequences with either 4 mm thick slices at 3T or 3 mm thick at 1.5T. Each file contains nearly all DICOM acquisition parameters except tags that specifically identify Private Health Information. Each case has had central gland (CG) and peripheral zone (PZ) outlines marked by Drs. Nicolas Bloch (Boston University School of Medicine) and Mirabela Rusu (Case Western University) or Drs. Henkjan Huisman, Geert Litjens, or Jurgen Futterer at RUNMC Netherlands.
Data Access
Version 1: Updated 2015/08/20
| Title | Data Type | Format | Access Points | Subjects | License | |||
|---|---|---|---|---|---|---|---|---|
| NCI Challenge Data - Training | Segmentation | NRRD and ZIP | 60 | CC BY 3.0 | ||||
| NCI Challenge Data - Leaderboard | Segmentation | NRRD and ZIP | 10 | CC BY 3.0 | ||||
| NCI Challenge Data - Test | Segmentation | NRRD and ZIP | 10 | CC BY 3.0 | ||||
| Source Image Data - Training | MR | DICOM | 60 | 60 | 60 | 1,555 | CC BY 3.0 | |
| Source Image Data - Leaderboard | MR | DICOM | 10 | 10 | 10 | 261 | CC BY 3.0 | |
| Source Image Data - Test | MR | DICOM | 10 | 10 | 10 | 271 | CC BY 3.0 |
Citations & Data Usage Policy
Data Citation Required: Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution must include the following citation, including the Digital Object Identifier:
Data Citation |
|
|
Bloch N, Madabhushi A, Huisman H, Freymann J, Kirby J, Grauer M, Enquobahrie A, Jaffe C, Clarke L, Farahani K. (2015). NCI-ISBI 2013 Challenge: Automated Segmentation of Prostate Structures. The Cancer Imaging Archive. http://doi.org/10.7937/K9/TCIA.2015.zF0vlOPv |
Detailed Description
Training Data can be further split by source Collection:
- NCI_ISBI_Challenge-Prostate3T_Training_Segmentations.zip in NRRD format
- NCI_ISBI_Challenge-ProstateDx_Training_Segmentations.zip in NRRD format
Related Publications
Publications by the Dataset Authors
No publications by dataset authors were found.
Research Community Publications
TCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you’d like to add please contact the TCIA Helpdesk.